Gene Ontology Browsing Utility

Gene Ontology Browsing Utility (hereinafter, GOBU, pronounced as "go-boo") is a browsing and manipulating tool for Post-Pipeline genetic data, especially useful for data with GO annotations. With help of GOBU, we expect biologists and their cooperating technicians can pay less effort on common programming stuff. At the same time, GOBU provides an Extendable Architecture which guarantees the possibility of

Arbitrary Data Description,
Data Integration, and
Extendable User Interface.

Shortcuts to Useful Plugins

Observe expression changes of given GO annotation

See GO hierarchy of given GO terms

Compute GO enrichment P-values

List all kinds of integrated information

Get functional distribution

Documentation

We believe that GOBU is a useful tool, so we suggest:

Overview: For everbody, we suggest your reading on GOBU overview.
Case Studies: How GOBU help biologists.
Big Map: The global view of GOBU.
Operation Manual: GOBU operation rules and manual.
Technical Section: Processing your own data into GOBU format.
GOBU Applet Section.: To use GOBU as an applet program on your web server.
Plugin Page: GOBU plugin information, including plugin writting and plugin list.
Compile: Want to build GOBU by yourself? Please read this.

Download

The latest release of GOBU is available at the download area of the GOBU project.

Contact

Please raise an issue at here if you have any questions.

Reference

Lin WD, Chen YC, Ho JM, Hsiao CD. GOBU: Toward an Integration Interface for Biological Objects. Journal of Information Science and Engineering. 2006 22(1):19-29.